BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004C10LP1|AL425242
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1066 1230 0.0
3x_Contig371 520 e-147
>3x_Contig1066
Length = 4816
Score = 1230 bits (619), Expect = 0.0
Identities = 647/653 (99%), Gaps = 3/653 (0%)
Strand = Plus / Plus
Query: 304 atagacagtactctcattttcatgggaataatgatcggtaccaaaccggacgatatgcat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagacagtactctcattttcatgggaataatgatcggtaccaaaccggacgatatgcat 60
Query: 364 atcaagaaaatgggaataggtacaagggcttccaacggaatggatcagggaaccgaagat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcaagaaaatgggaataggtacaagggcttccaacggaatggatcagggaaccgaagat 120
Query: 424 actcccgcgaggg-tttgggtctcaacttaggaataatgagaacgaatctcgtccaatac 482
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actcccgcgaggggtttgggtctcaacttaggaataatgagaacgaatctcgtccaatac 180
Query: 483 ggtcgcagtcgcgtggtatcagcgagattcctcgtaatcccttcgcaacgcgtccagtag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtcgcagtcgcgtggtatcagcgagattcctcgtaatcccttcgcaacgcgtccagtag 240
Query: 543 tgagtgcgaaatacgatcgcgatgagtttaatacaaaatatcattattacgacattgtaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgagtgcgaaatacgatcgcgatgagtttaatacaaaatatcattattacgacattgtaa 300
Query: 603 gtaaacgactacgaaatgaatccagcttcaagaaatggaaatctgagaagattcctgagc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtaaacgactacgaaatgaatccagcttcaagaaatggaaatctgagaagattcctgagc 360
Query: 663 atggatatgtgacaacaacggagtgawttgcatcggataagcaaaaaccaatactcatgg 722
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 361 atggatatgtgacaacaacggagttgattgcatcggataagcaaaaaccaatactcatgg 420
Query: 723 ccaggcagcctgaacaaacttcggtggatccgagaatacgtcctatgaatggggatgcgg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccaggcagcctgaacaaacttcggtggatccgagaatacgtcctatgaatggggatgcgg 480
Query: 783 tctctgggtccatttctgcgaaaaagagatatagaaagcttagaagtgcattggtacgca 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctctgggtccatttctgcgaaaaagagatatagaaagcttagaagtgcattggtacgca 540
Query: 843 actcgcgaattccgtatgattctttctacattggtcctgaacctccaaaagaaatcatag 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actcgcgaattccgtatgattctttctacattggtcctgaacctccaaaagaaatcatag 600
Query: 903 tatacccttctgcatctaacc-acaaccaatagcag-cgcattatctgaagca 953
||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 601 tatacccttctgcatctaaccaacaaccaatagcagccgcattatctgaagca 653
>3x_Contig371
Length = 1168
Score = 520 bits (262), Expect = e-147
Identities = 263/264 (99%)
Strand = Plus / Minus
Query: 1 ctcacttgttgtattacactggcccggaaaagacatatatctcatctcatctccatrgac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 264 ctcacttgttgtattacactggcccggaaaagacatatatctcatctcatctccatggac 205
Query: 61 catttttaacataatattaaaaacagtctttatgtagctttttgatctttttctgatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 catttttaacataatattaaaaacagtctttatgtagctttttgatctttttctgatttt 145
Query: 121 ctcgattttctccaatattgaaacaaaatatggtaaataatgaaattgaatattaatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ctcgattttctccaatattgaaacaaaatatggtaaataatgaaattgaatattaatcaa 85
Query: 181 aagtatcattattcgcttctccatctataagttcagttttggcaatacttctagtatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 aagtatcattattcgcttctccatctataagttcagttttggcaatacttctagtatttc 25
Query: 241 atctagcataagttgctattccag 264
||||||||||||||||||||||||
Sbjct: 24 atctagcataagttgctattccag 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7677
Number of Sequences: 1807
Number of extensions: 7677
Number of successful extensions: 226
Number of sequences better than 1.0e-20: 2
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)